There are three sequences used in the compliance documentation for sample queries and in the compliance test suite for API testing
-
NC_001422.1 Enterobacteria phage phiX174 sensu lato
fasta sequnce
Circular genome
Size : 5386
MD5 : 3332ed720ac7eaa9b3655c06f6b9e196
Tuncated SHA512 : 2085c82d80500a91dd0b8aa9237b0e43f1c07809bd6e6785 -
I Saccharomyces_cerevisiae chromosome:R64-1-1:I:1:230218:1
fasta sequence
Linear chromosome
Size : 230218
MD5 : 6681ac2f62509cfc220d78751b8dc524
Tuncated SHA512 : 959cb1883fc1ca9ae1394ceb475a356ead1ecceff5824ae7 -
VI Saccharomyces_cerevisiae chromosome:R64-1-1:VI:1:270161:1
fasta sequence
Linear chromosome
Size : 270161
MD5 : b7ebc601f9a7df2e1ec5863deeae88a3
Tuncated SHA512 : cfea89816a1a711055efbcdc32064df44feeb6b773990b07
Checksums will be used as identifiers in sequence retrieval and metadata retrieval APIs. There are currently two checksum algorithms in use:
- MD5
- GA4GH
Implementation details of these algorithms are given in API specification doc here.
Server MUST implement MD5 while others are optional